According to the special features of civil aviation majors and the professional career employees of the physical quality requirements, this paper uses the literature material method, experimental method and mathematical statistics method, in order to put our school football courses teaching as the breakthrough point, tries to explore the feasibility and necessity of application of core strength training in the sports teaching in civil aviation universities. Through the analysis of the control and experimental groups and the test data before and after the experiment, we can see that after the experiment, the four special physical qualities of the experimental group are higher compared with the control group, and the core strength level index exists significant differences between the experimental group and control group on the performances (P < 0.001). This shows that core strength has remarkable effect on improving the physical qualities of civil aviation students.